Changed MPI routines to hypre_MPI routines. Added hypre_printf, etc. routines. Added AUTOTEST tests to look for 'int' and 'MPI_' calls. Added a new approach for the Fortran interface (not implemented everywhere yet).
348 lines
9.4 KiB
C
348 lines
9.4 KiB
C
/*BHEADER**********************************************************************
|
|
* Copyright (c) 2008, Lawrence Livermore National Security, LLC.
|
|
* Produced at the Lawrence Livermore National Laboratory.
|
|
* This file is part of HYPRE. See file COPYRIGHT for details.
|
|
*
|
|
* HYPRE is free software; you can redistribute it and/or modify it under the
|
|
* terms of the GNU Lesser General Public License (as published by the Free
|
|
* Software Foundation) version 2.1 dated February 1999.
|
|
*
|
|
* $Revision$
|
|
***********************************************************************EHEADER*/
|
|
|
|
|
|
|
|
|
|
|
|
#include "headers.h"
|
|
|
|
/*--------------------------------------------------------------------------
|
|
* hypre_GenerateDifConv
|
|
*--------------------------------------------------------------------------*/
|
|
|
|
HYPRE_ParCSRMatrix
|
|
GenerateDifConv( MPI_Comm comm,
|
|
HYPRE_Int nx,
|
|
HYPRE_Int ny,
|
|
HYPRE_Int nz,
|
|
HYPRE_Int P,
|
|
HYPRE_Int Q,
|
|
HYPRE_Int R,
|
|
HYPRE_Int p,
|
|
HYPRE_Int q,
|
|
HYPRE_Int r,
|
|
double *value )
|
|
{
|
|
hypre_ParCSRMatrix *A;
|
|
hypre_CSRMatrix *diag;
|
|
hypre_CSRMatrix *offd;
|
|
|
|
HYPRE_Int *diag_i;
|
|
HYPRE_Int *diag_j;
|
|
double *diag_data;
|
|
|
|
HYPRE_Int *offd_i;
|
|
HYPRE_Int *offd_j;
|
|
double *offd_data;
|
|
|
|
HYPRE_Int *global_part;
|
|
HYPRE_Int ix, iy, iz;
|
|
HYPRE_Int cnt, o_cnt;
|
|
HYPRE_Int local_num_rows;
|
|
HYPRE_Int *col_map_offd;
|
|
HYPRE_Int row_index;
|
|
HYPRE_Int i,j;
|
|
|
|
HYPRE_Int nx_local, ny_local, nz_local;
|
|
HYPRE_Int nx_size, ny_size, nz_size;
|
|
HYPRE_Int num_cols_offd;
|
|
HYPRE_Int grid_size;
|
|
|
|
HYPRE_Int *nx_part;
|
|
HYPRE_Int *ny_part;
|
|
HYPRE_Int *nz_part;
|
|
|
|
HYPRE_Int num_procs, my_id;
|
|
HYPRE_Int P_busy, Q_busy, R_busy;
|
|
|
|
hypre_MPI_Comm_size(comm,&num_procs);
|
|
hypre_MPI_Comm_rank(comm,&my_id);
|
|
|
|
grid_size = nx*ny*nz;
|
|
|
|
hypre_GeneratePartitioning(nx,P,&nx_part);
|
|
hypre_GeneratePartitioning(ny,Q,&ny_part);
|
|
hypre_GeneratePartitioning(nz,R,&nz_part);
|
|
|
|
global_part = hypre_CTAlloc(HYPRE_Int,P*Q*R+1);
|
|
|
|
global_part[0] = 0;
|
|
cnt = 1;
|
|
for (iz = 0; iz < R; iz++)
|
|
{
|
|
nz_size = nz_part[iz+1]-nz_part[iz];
|
|
for (iy = 0; iy < Q; iy++)
|
|
{
|
|
ny_size = ny_part[iy+1]-ny_part[iy];
|
|
for (ix = 0; ix < P; ix++)
|
|
{
|
|
nx_size = nx_part[ix+1] - nx_part[ix];
|
|
global_part[cnt] = global_part[cnt-1];
|
|
global_part[cnt++] += nx_size*ny_size*nz_size;
|
|
}
|
|
}
|
|
}
|
|
|
|
nx_local = nx_part[p+1] - nx_part[p];
|
|
ny_local = ny_part[q+1] - ny_part[q];
|
|
nz_local = nz_part[r+1] - nz_part[r];
|
|
|
|
my_id = r*(P*Q) + q*P + p;
|
|
num_procs = P*Q*R;
|
|
|
|
local_num_rows = nx_local*ny_local*nz_local;
|
|
diag_i = hypre_CTAlloc(HYPRE_Int, local_num_rows+1);
|
|
offd_i = hypre_CTAlloc(HYPRE_Int, local_num_rows+1);
|
|
|
|
P_busy = hypre_min(nx,P);
|
|
Q_busy = hypre_min(ny,Q);
|
|
R_busy = hypre_min(nz,R);
|
|
|
|
num_cols_offd = 0;
|
|
if (p) num_cols_offd += ny_local*nz_local;
|
|
if (p < P_busy-1) num_cols_offd += ny_local*nz_local;
|
|
if (q) num_cols_offd += nx_local*nz_local;
|
|
if (q < Q_busy-1) num_cols_offd += nx_local*nz_local;
|
|
if (r) num_cols_offd += nx_local*ny_local;
|
|
if (r < R_busy-1) num_cols_offd += nx_local*ny_local;
|
|
|
|
if (!local_num_rows) num_cols_offd = 0;
|
|
|
|
col_map_offd = hypre_CTAlloc(HYPRE_Int, num_cols_offd);
|
|
|
|
cnt = 1;
|
|
o_cnt = 1;
|
|
diag_i[0] = 0;
|
|
offd_i[0] = 0;
|
|
for (iz = nz_part[r]; iz < nz_part[r+1]; iz++)
|
|
{
|
|
for (iy = ny_part[q]; iy < ny_part[q+1]; iy++)
|
|
{
|
|
for (ix = nx_part[p]; ix < nx_part[p+1]; ix++)
|
|
{
|
|
diag_i[cnt] = diag_i[cnt-1];
|
|
offd_i[o_cnt] = offd_i[o_cnt-1];
|
|
diag_i[cnt]++;
|
|
if (iz > nz_part[r])
|
|
diag_i[cnt]++;
|
|
else
|
|
{
|
|
if (iz)
|
|
{
|
|
offd_i[o_cnt]++;
|
|
}
|
|
}
|
|
if (iy > ny_part[q])
|
|
diag_i[cnt]++;
|
|
else
|
|
{
|
|
if (iy)
|
|
{
|
|
offd_i[o_cnt]++;
|
|
}
|
|
}
|
|
if (ix > nx_part[p])
|
|
diag_i[cnt]++;
|
|
else
|
|
{
|
|
if (ix)
|
|
{
|
|
offd_i[o_cnt]++;
|
|
}
|
|
}
|
|
if (ix+1 < nx_part[p+1])
|
|
diag_i[cnt]++;
|
|
else
|
|
{
|
|
if (ix+1 < nx)
|
|
{
|
|
offd_i[o_cnt]++;
|
|
}
|
|
}
|
|
if (iy+1 < ny_part[q+1])
|
|
diag_i[cnt]++;
|
|
else
|
|
{
|
|
if (iy+1 < ny)
|
|
{
|
|
offd_i[o_cnt]++;
|
|
}
|
|
}
|
|
if (iz+1 < nz_part[r+1])
|
|
diag_i[cnt]++;
|
|
else
|
|
{
|
|
if (iz+1 < nz)
|
|
{
|
|
offd_i[o_cnt]++;
|
|
}
|
|
}
|
|
cnt++;
|
|
o_cnt++;
|
|
}
|
|
}
|
|
}
|
|
|
|
diag_j = hypre_CTAlloc(HYPRE_Int, diag_i[local_num_rows]);
|
|
diag_data = hypre_CTAlloc(double, diag_i[local_num_rows]);
|
|
|
|
if (num_procs > 1)
|
|
{
|
|
offd_j = hypre_CTAlloc(HYPRE_Int, offd_i[local_num_rows]);
|
|
offd_data = hypre_CTAlloc(double, offd_i[local_num_rows]);
|
|
}
|
|
|
|
row_index = 0;
|
|
cnt = 0;
|
|
o_cnt = 0;
|
|
for (iz = nz_part[r]; iz < nz_part[r+1]; iz++)
|
|
{
|
|
for (iy = ny_part[q]; iy < ny_part[q+1]; iy++)
|
|
{
|
|
for (ix = nx_part[p]; ix < nx_part[p+1]; ix++)
|
|
{
|
|
diag_j[cnt] = row_index;
|
|
diag_data[cnt++] = value[0];
|
|
if (iz > nz_part[r])
|
|
{
|
|
diag_j[cnt] = row_index-nx_local*ny_local;
|
|
diag_data[cnt++] = value[3];
|
|
}
|
|
else
|
|
{
|
|
if (iz)
|
|
{
|
|
offd_j[o_cnt] = hypre_map(ix,iy,iz-1,p,q,r-1,P,Q,R,
|
|
nx_part,ny_part,nz_part,global_part);
|
|
offd_data[o_cnt++] = value[3];
|
|
}
|
|
}
|
|
if (iy > ny_part[q])
|
|
{
|
|
diag_j[cnt] = row_index-nx_local;
|
|
diag_data[cnt++] = value[2];
|
|
}
|
|
else
|
|
{
|
|
if (iy)
|
|
{
|
|
offd_j[o_cnt] = hypre_map(ix,iy-1,iz,p,q-1,r,P,Q,R,
|
|
nx_part,ny_part,nz_part,global_part);
|
|
offd_data[o_cnt++] = value[2];
|
|
}
|
|
}
|
|
if (ix > nx_part[p])
|
|
{
|
|
diag_j[cnt] = row_index-1;
|
|
diag_data[cnt++] = value[1];
|
|
}
|
|
else
|
|
{
|
|
if (ix)
|
|
{
|
|
offd_j[o_cnt] = hypre_map(ix-1,iy,iz,p-1,q,r,P,Q,R,
|
|
nx_part,ny_part,nz_part,global_part);
|
|
offd_data[o_cnt++] = value[1];
|
|
}
|
|
}
|
|
if (ix+1 < nx_part[p+1])
|
|
{
|
|
diag_j[cnt] = row_index+1;
|
|
diag_data[cnt++] = value[4];
|
|
}
|
|
else
|
|
{
|
|
if (ix+1 < nx)
|
|
{
|
|
offd_j[o_cnt] = hypre_map(ix+1,iy,iz,p+1,q,r,P,Q,R,
|
|
nx_part,ny_part,nz_part,global_part);
|
|
offd_data[o_cnt++] = value[4];
|
|
}
|
|
}
|
|
if (iy+1 < ny_part[q+1])
|
|
{
|
|
diag_j[cnt] = row_index+nx_local;
|
|
diag_data[cnt++] = value[5];
|
|
}
|
|
else
|
|
{
|
|
if (iy+1 < ny)
|
|
{
|
|
offd_j[o_cnt] = hypre_map(ix,iy+1,iz,p,q+1,r,P,Q,R,
|
|
nx_part,ny_part,nz_part,global_part);
|
|
offd_data[o_cnt++] = value[5];
|
|
}
|
|
}
|
|
if (iz+1 < nz_part[r+1])
|
|
{
|
|
diag_j[cnt] = row_index+nx_local*ny_local;
|
|
diag_data[cnt++] = value[6];
|
|
}
|
|
else
|
|
{
|
|
if (iz+1 < nz)
|
|
{
|
|
offd_j[o_cnt] = hypre_map(ix,iy,iz+1,p,q,r+1,P,Q,R,
|
|
nx_part,ny_part,nz_part,global_part);
|
|
offd_data[o_cnt++] = value[6];
|
|
}
|
|
}
|
|
row_index++;
|
|
}
|
|
}
|
|
}
|
|
|
|
if (num_procs > 1)
|
|
{
|
|
for (i=0; i < num_cols_offd; i++)
|
|
col_map_offd[i] = offd_j[i];
|
|
|
|
qsort0(col_map_offd, 0, num_cols_offd-1);
|
|
|
|
for (i=0; i < num_cols_offd; i++)
|
|
for (j=0; j < num_cols_offd; j++)
|
|
if (offd_j[i] == col_map_offd[j])
|
|
{
|
|
offd_j[i] = j;
|
|
break;
|
|
}
|
|
}
|
|
|
|
A = hypre_ParCSRMatrixCreate(comm, grid_size, grid_size,
|
|
global_part, global_part, num_cols_offd,
|
|
diag_i[local_num_rows],
|
|
offd_i[local_num_rows]);
|
|
|
|
hypre_ParCSRMatrixColMapOffd(A) = col_map_offd;
|
|
|
|
diag = hypre_ParCSRMatrixDiag(A);
|
|
hypre_CSRMatrixI(diag) = diag_i;
|
|
hypre_CSRMatrixJ(diag) = diag_j;
|
|
hypre_CSRMatrixData(diag) = diag_data;
|
|
|
|
offd = hypre_ParCSRMatrixOffd(A);
|
|
hypre_CSRMatrixI(offd) = offd_i;
|
|
if (num_cols_offd)
|
|
{
|
|
hypre_CSRMatrixJ(offd) = offd_j;
|
|
hypre_CSRMatrixData(offd) = offd_data;
|
|
}
|
|
|
|
hypre_TFree(nx_part);
|
|
hypre_TFree(ny_part);
|
|
hypre_TFree(nz_part);
|
|
|
|
return (HYPRE_ParCSRMatrix) A;
|
|
}
|
|
|